Oxford University Department of Biochemistry
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Stuart Ferguson
Structure function and biogenesis of bacterial respiratory proteins

Co-workers: Dr Julie Stevens, Dr Alan Goddard, Dr Katie Sam, Despoina Mavridou, Edgar Harvat, Naomi Shelton, Michael Lukey, Prof Yiling Song, Dr Shilpa Bali

Bacterial respiratory pathways are diverse and complex and include cytochromes c and a variety of metalloenzymes. Our work aims to understand the assembly of these cofactor-containing proteins and how they function. In collaboration with colleagues in Molecular Biophysics we obtained the crystal structure of the bacterial respiratory enzyme nitrite reductase. This enzyme is involved in the nitrogen cycle in the process of denitrification, which, if occurring at nadequate rates will have adverse effects on the environment (eg. high levels of nitrate in soil or release of nitrous oxide into the atmosphere). A major group of respiratory proteins, the c-type cytochromes, contain covalently linked heme groups. The attachment of the heme to the protein is complex and involves many proteins, including ransmembrane transport proteins and proteins that function in disulphide bond isomerisation.

Proteins involved in disulphide bond formation are of particular significance because many extracellular bacterial toxins contain disulphide bonds and it is therefore important to understand the mechanisms by which these bonds form. In Gram-negative bacteria the protein and the heme cofactor must be transported to the periplasm for the c-type cytochrome assembly process. It is not known how the heme is transported across the membrane or how it becomes attached to the cytochrome polypeptide. We employ an array of methodologies to study the respiratory proteins and the processes involved in their assembly.


Publications

Research Images


Figure 1: Cytochrome cd1 nitrite reductase


Figure 2: The nitrogen cycle


Figure 3: NMR studies of cDsbD
(with Dr Christina Redfield - Cover figure on the 20 July 2007 issue of the Journal of Molecular Biology)


Figure 4: Cytochrome c maturation system in E. coli


Figure 5: Redox potentiometry of a heme-containing protein

Contact: stuart.ferguson@bioch.ox.ac.uk

Graduate Student and Postdoctoral Positions: Enquiries with CV welcome

Website: http://www2.bioch.ox.ac.uk/~sjflab

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